BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G01LP1|AL428770
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1690 1715 0.0
>3x_Contig1690
Length = 13018
Score = 1715 bits (865), Expect = 0.0
Identities = 868/869 (99%)
Strand = Plus / Minus
Query: 1 attgcaaacttctacagctcatggactaggactcctggtatcccaatcatttctgtaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6443 attgcaaacttctacagctcatggactaggactcctggtatcccaatcatttctgtaaat 6384
Query: 61 actgatactgaaaggactaccttggaacagcaccgtttccttttggaaaagacagatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6383 actgatactgaaaggactaccttggaacagcaccgtttccttttggaaaagacagatgtt 6324
Query: 121 gaggacattccttaccatattccactttttgcagttcaatcttcaggagaggatgatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6323 gaggacattccttaccatattccactttttgcagttcaatcttcaggagaggatgatact 6264
Query: 181 aagaatggattatttactgatagaactctgaaattatccgaacccgaacttattgtgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6263 aagaatggattatttactgatagaactctgaaattatccgaacccgaacttattgtgaac 6204
Query: 241 agtggagccaggggcctataccgtgtttcttatgagacggataaatgctacgagttgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6203 agtggagccaggggcctataccgtgtttcttatgagacggataaatgctacgagttgatc 6144
Query: 301 aatgaagccctcaagaactctaaaatttccgatttggatttattcaaaatattcattgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6143 aatgaagccctcaagaactctaaaatttccgatttggatttattcaaaatattcattgac 6084
Query: 361 ctgagatctctaataggcagtgaataccaaaaaaagatacacatcgatggtgtcttaatg 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6083 ctgagatctctaataggcagtgaataccaaagaaagatacacatcgatggtgtcttaatg 6024
Query: 421 atattgaggtgcctggcatcacatgttgatttaacggaagaactataccgtggattatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6023 atattgaggtgcctggcatcacatgttgatttaacggaagaactataccgtggattatct 5964
Query: 481 atcggtttagatatcttgcaaaccatagaaaatgctttaagaacatacaccggtaaatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5963 atcggtttagatatcttgcaaaccatagaaaatgctttaagaacatacaccggtaaatct 5904
Query: 541 gagaaagctttcattactgatatttatgtccctctatgggataaattttcttggaatgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 gagaaagctttcattactgatatttatgtccctctatgggataaattttcttggaatgac 5844
Query: 601 tttcacgtttcctcatatcagctaaaagttatgtcaaaggtgatgtttggtatcaaacat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843 tttcacgtttcctcatatcagctaaaagttatgtcaaaggtgatgtttggtatcaaacat 5784
Query: 661 ttggactcaaccttgactgtggccaatcaattaatgaaaaagatcttgtctggtccaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5783 ttggactcaaccttgactgtggccaatcaattaatgaaaaagatcttgtctggtccaaat 5724
Query: 721 aagtccattcctttggaattgtgcggaagtgtgttcgccactgtctcctgtcatcaaaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5723 aagtccattcctttggaattgtgcggaagtgtgttcgccactgtctcctgtcatcaaaag 5664
Query: 781 aatgtcaaacagtggaaaaaattatatgagctagttaagtctgcaaagggtgttgaatct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5663 aatgtcaaacagtggaaaaaattatatgagctagttaagtctgcaaagggtgttgaatct 5604
Query: 841 catgttgacggtggatcttctattgacat 869
|||||||||||||||||||||||||||||
Sbjct: 5603 catgttgacggtggatcttctattgacat 5575
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6735
Number of Sequences: 1807
Number of extensions: 6735
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)